Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq67374 93.3 3e-14 >seq67374 Length=1687 Score = 93.3 bits (102), Expect = 3e-14 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || ||||||||| ||||| ||||| || | || |||| ||| Sbjct 678 ACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGGCCATCTTCC 737 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||| || || ||||| || || || ||||| ||| | || | || |||||||| Sbjct 738 AACTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGAGGGATACCTTCCTTGTCCTGG 797 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 || || |||||| || || || | || | ||||| || | ||| ||||||| Sbjct 798 ATTTTAGCTTTGAC--ATTCTCAATAGTGTCTGATGGTTCAACCTCAAGGGTGATGGTTT 855 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || ||||| || || ||||||||||||||| Sbjct 856 TGCCAGTGAGGGTTTTGACAAAGATCTGCATA 887 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || ||||||||| ||||| ||||| || | || |||| ||| Sbjct 450 ACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCTTCC 509 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || || || || |||||| | || | || |||||||| Sbjct 510 AGCTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCCTGG 569 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 || || ||||||| | || | || | || || || | || |||||||| Sbjct 570 ATTTTGGCTTTGACGTTCTCAATGGTGTCTGATGGTTCGACCTCCAGAGTGATGGTTTTG 629 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| || || ||||||||||||||| Sbjct 630 CCAGTGAGGGTTTTGACAAAGATCTGCATA 659 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || ||||||||| ||||| ||||| || | || |||| ||| Sbjct 906 ACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCTTCC 965 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||| || || ||||| || || || || |||||| | || | || || ||||| Sbjct 966 AACTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGTGGGATACCTTCTTTGTCCTGG 1025 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 || || ||||||| | || | || | ||||| || | || |||||||| Sbjct 1026 ATTTTTGCTTTGACGTTCTCAATGGTGTCTGATGGTTCAACCTCCAGAGTGATGGTTTTG 1085 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| || || ||||||||||||||| Sbjct 1086 CCAGTGAGGGTTTTGACAAAGATCTGCATA 1115 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| || ||||||||| ||||||||||| || | || |||| || Sbjct 1361 AACCAAGTGAAGAGTAGATTCTTTCTGGATGTTATAGTCACTCAGTGTACGACCATCCTC 1420 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 |||||| || || ||||| || | || ||||| ||| | || | || || ||||| Sbjct 1421 CAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGAGGGATACCTTCTTTGTCCTG 1480 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 || || |||||| | | || | || | || || || | ||| ||||| || Sbjct 1481 GATTTTTGCTTTGACATTTTCAATGGTGTCTGATGGTTCGACCTCAAGGGTGATGGTCTT 1540 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| || || |||||||||||||| Sbjct 1541 GCCAGTGAGGGTTTTGACAAAGATCTGCAT 1570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323770080203640