Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq31712 118 1e-21 >seq31712 Length=423171 Score = 118 bits (130), Expect = 1e-21 Identities = 166/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || ||||| ||||| | || || |||||||| ||||| ||||||||||| ||||| ||| Sbjct 323928 ACGCCAATTGGACCCATTCCTGGTCCTCCACCACCATGAGGAATACAGAACGTCTTGTGT 323869 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 ||||| | |||| | || || || ||||| || | ||| ||||| || |||||| Sbjct 323868 AAATTCAAATGAGAGACGTCGGCTCCATAATCGCCGGGTCGGCACAGACCAACTTGTGCA 323809 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || |||||||| ||||| || ||||| || || || | || | || | | Sbjct 323808 TTCATGTTGGCACCATCCAGATAGACTTGACCTCCGGCATCGTGGATCATGTCGCACAAC 323749 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAAT 138415 | |||| || | |||||| |||||| || ||||| || || | ||| || Sbjct 323748 TCCCTGACGTCTTCTTCAAAGACACCACTGGTTGATGGGTAGGTCAACATGAT 323696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577418783802600