Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1679 105 8e-18 >seq1679 Length=151814 Score = 105 bits (116), Expect = 8e-18 Identities = 151/209 (72%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 76409 CTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACT--ACGACTGGGATGTTCTCA 76466 |||||| ||||||||| || |||| ||| | || | || |||||||||||| ||||| Sbjct 50041 CTTCAGCACGATATGTGG-AATGTGACACCCA-CTGATCTCCACGACTGGGATGCTCTCA 50098 Query 76467 AGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAG 76526 || || || || | || | || ||||| || |||||||||| ||||| || | Sbjct 50099 AGAAAGAGATTGCCCAGCATGGAGTACGGAACAGCCTGCTGATGGCACCGATGCCGACGG 50158 Query 76527 CCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCT 76586 | ||||| ||||| ||| |||| || || ||| | ||||||| ||||| | || |||| Sbjct 50159 CATCCACGGCACAGATCCTGGGGAACAACGAAGCCATTGAACCTTACACCAGCAATATCT 50218 Query 76587 ACCTGAGAAGAACCCTCGCAGGTGAGTTT 76615 || |||||| || |||| |||||| Sbjct 50219 ACTCCAGAAGAGTACTATCAGGGGAGTTT 50247 Score = 82.4 bits (90), Expect = 9e-11 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 75899 CAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAAC 75958 ||||| || || || || || |||||||||||||||||||| || |||| ||| ||| Sbjct 45780 CAGACTGAAACGGGCACTCCGTATATGCTTTACAAGGATGCCTGCAACAGGAAATCAAAC 45839 Query 75959 CAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACA 76016 || |||| ||||||| |||||| || || || || || |||||| | || |||| Sbjct 45840 CAGCAGAACCTGGGAACTATCAAGTGCAGCAACCTCTGTACCGAAATTGTGGAATACA 45897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594942046274400