Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq190700 111 5e-19 seq534 84.2 6e-11 >seq190700 Length=4627 Score = 111 bits (122), Expect = 5e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133076 TTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAACAGCAAGAT 133135 ||||| || || |||||| | | | || || ||||||||||| |||||| | ||| Sbjct 2865 TTTGTCATATTTCCAATTGAATATCATGATATCTGGCAGATGTACAAAAAAGCGGAAGCG 2806 Query 133136 TTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACTGGGAAGCCCTT 133195 | ||||||||| | ||||||||||| || || ||| ||| ||||||| ||| Sbjct 2805 TCATTTTGGACGGCTGAGGAAGTAGATTTGTCAAAGGACTTGATCCATTGGGAAGGCCTG 2746 Query 133196 ACTGGGGATGAAAAACATTTTATTTCT-ATGATTTTAGCGTTTTTTGCTGCGAGTGATGG 133254 | | ||||||| ||||||||||| ||| | || || ||||||||||| |||||||| Sbjct 2745 AAAGATGATGAAAGGCATTTTATTTCACATG-TATTGGCTTTTTTTGCTGCAAGTGATGG 2687 Query 133255 TATTGTTCTTGAAAATTT 133272 ||||| |||||| || Sbjct 2686 CATTGTCAATGAAAACTT 2669 >seq534 Length=462268 Score = 84.2 bits (92), Expect = 6e-11 Identities = 103/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 251404 GCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGC 251463 || || |||||||| ||||| ||||| || || |||| ||| || | ||| | || Sbjct 173738 GCTATCAGACCACAGAGGTTACAAACATGAACTCTATAAGGATCCGAAACTTCAAAGAGA 173679 Query 251464 CGACCCTTGGTGAAGC-GAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACC 251522 || | || | ||| | ||| | ||| || |||||| ||||||||| ||||| ||||| Sbjct 173678 CG-CTCTCGTAGAAACTGAGCAGAACCATGGGAAATCTGACAATCACGTTCCATCTCACC 173620 Query 251523 GAAACGAAGACCACCATC 251540 ||||||||||||||||| Sbjct 173619 AAAACGAAGACCACCATC 173602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1467701820761935