Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq67374 109 4e-19 >seq67374 Length=1687 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| || || ||||| ||||||||||| || | || |||| Sbjct 1359 AGAACCAAGTGAAGAGTAGATTCTTTCTGGATGTTATAGTCACTCAGTGTACGACCATCC 1418 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || || ||||||| || ||||| ||| | || | || || ||||| Sbjct 1419 TCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGAGGGATACCTTCTTTGTCC 1478 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | |||||| |||||| | | || | || | ||||| |||| ||| |||||| Sbjct 1479 TGGATTTTTGCTTTGACATTTTCAATGGTGTCTGATGGTTCGACCTCAAGGGTGATGGTC 1538 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 || || |||||||| || |||||||||||||| || Sbjct 1539 TTGCCAGTGAGGGTTTTGACAAAGATCTGCATTAT 1573 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| || || ||||| ||||| ||||| || | || |||| Sbjct 447 AGTACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCT 506 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || || ||||| || || || |||||| | || | || |||||||| Sbjct 507 TCCAGCTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCC 566 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| ||||||| | || | || | ||||| || | || ||||| Sbjct 567 TGGATTTTGGCTTTGACGTTCTCAATGGTGTCTGATGGTTCGACCTCCAGAGTGATGGTT 626 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || |||||||| || |||||||||||||| Sbjct 627 TTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 658 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| || || ||||| ||||| ||||| || | || |||| Sbjct 675 AGTACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGGCCATCT 734 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || || ||||| || || ||||| ||| | || | || |||||||| Sbjct 735 TCCAACTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGAGGGATACCTTCCTTGTCC 794 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | ||||| |||||| || || || | || | || || |||| ||| |||| Sbjct 795 TGGATTTTAGCTTTGAC--ATTCTCAATAGTGTCTGATGGTTCAACCTCAAGGGTGATGG 852 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || || |||||||| || |||||||||||||| Sbjct 853 TTTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 886 Score = 84.2 bits (92), Expect = 1e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| || ||| ||||| ||||| ||||| || | || |||| Sbjct 1131 AGTACCAAGTGAAGAGTAGACTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCT 1190 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || || ||||| || || || |||||| | || | || || ||||| Sbjct 1191 TCCAACTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGTGGGATACCTTCTTTGTCC 1250 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | |||||| || || || || || | || | || || |||| ||| |||| Sbjct 1251 TGGATTTTTGCCTTAAC--ATTCTCAATGGTGTCTGATGGTTCAACCTCAAGGGTGATGG 1308 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || |||||||| || || ||||||||||| Sbjct 1309 TCTTGCCAGTGAGGGTTTTGACGAAGATCTGCAT 1342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324826462749845