Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq482 86.0 8e-12 seq85835 84.2 3e-11 seq40372 84.2 3e-11 seq14741 84.2 3e-11 seq4354 82.4 1e-10 >seq482 Length=1421644 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| ||| ||||||| ||| |||||||||||| |||| Sbjct 759724 TCCTCGATAGTATAGTGGTAAGTATCTCCGCCTGTCGCGCGGAAGACCGGGGTTCAATTC 759783 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 759784 CCCGTCGGGGAG 759795 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 8656 ATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 8715 |||||||| |||||||||||| ||||| ||| ||||| | ||| |||||||||||| || Sbjct 469944 ATTCCTCGATAGTATAGTGGTGAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCAAT 470003 Query 8716 TCCCCGACGAGGAG 8729 |||||| || |||| Sbjct 470004 TCCCCGTCGGGGAG 470017 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| || |||||| | |||||||||||| ||| |||||| ||| |||| | |||||| Sbjct 759796 ACTCCCCGACGGGGAATTGAACCCCGGTCTTCCGCGCGACAGGCGGAGATACTTACCACT 759737 Query 139412 ATACTAACGAGGATTT 139427 |||||| ||||||||| Sbjct 759736 ATACTATCGAGGATTT 759721 Score = 82.4 bits (90), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 11726 CCAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCG 11784 ||| |||||| ||||||||||||| |||| ||| ||||| | ||| |||||||||||| Sbjct 455984 CCAATCCTCGATAGTATAGTGGTAAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCA 456043 Query 11785 ATTCCCCGACGAGGAGG 11801 |||||||| || ||||| Sbjct 456044 ATTCCCCGTCGGGGAGG 456060 Score = 82.4 bits (90), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 11726 CCAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCG 11784 ||| |||||| ||||||||||||| |||| ||| ||||| | ||| |||||||||||| Sbjct 480872 CCAATCCTCGATAGTATAGTGGTAAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCA 480931 Query 11785 ATTCCCCGACGAGGAGG 11801 |||||||| || ||||| Sbjct 480932 ATTCCCCGTCGGGGAGG 480948 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| ||||||||||||| |||| ||| ||||||| ||| |||||||||||| |||| Sbjct 759724 TCCTCGATAGTATAGTGGTAAGTATCTCCGCCTGTCGCGCGGAAGACCGGGGTTCAATTC 759783 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 759784 CCCGTCGGGGAG 759795 >seq85835 Length=1634 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 8656 ATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 8715 |||||||| |||||||||||| ||||| ||| ||||| | ||| |||||||||||| || Sbjct 1412 ATTCCTCGATAGTATAGTGGTAAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCAAT 1471 Query 8716 TCCCCGACGAGGAG 8729 |||||| || |||| Sbjct 1472 TCCCCGTCGGGGAG 1485 >seq40372 Length=1401 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 8656 ATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 8715 |||||||| |||||||||||| ||||| ||| ||||| | ||| |||||||||||| || Sbjct 717 ATTCCTCGATAGTATAGTGGTAAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCAAT 776 Query 8716 TCCCCGACGAGGAG 8729 |||||| || |||| Sbjct 777 TCCCCGTCGGGGAG 790 >seq14741 Length=58837 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 8656 ATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 8715 |||||||| |||||||||||| ||||| ||| ||||| | ||| |||||||||||| || Sbjct 43051 ATTCCTCGATAGTATAGTGGTAAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCAAT 42992 Query 8716 TCCCCGACGAGGAG 8729 |||||| || |||| Sbjct 42991 TCCCCGTCGGGGAG 42978 Score = 82.4 bits (90), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 11726 CCAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCG 11784 ||| |||||| ||||||||||||| |||| ||| ||||| | ||| |||||||||||| Sbjct 32084 CCAATCCTCGATAGTATAGTGGTAAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCA 32025 Query 11785 ATTCCCCGACGAGGAGG 11801 |||||||| || ||||| Sbjct 32024 ATTCCCCGTCGGGGAGG 32008 Score = 82.4 bits (90), Expect = 1e-10 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||||||| |||||||||||| ||||| ||| ||||| | ||| |||||||||||| || Sbjct 52987 AGTCCTCGATAGTATAGTGGTGAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCAAT 52928 Query 11787 TCCCCGACGAGGAGG 11801 |||||| || ||||| Sbjct 52927 TCCCCGTCGGGGAGG 52913 Score = 82.4 bits (90), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 11726 CCAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCG 11784 ||| |||||| ||||||||||||| |||| ||| ||||| | ||| |||||||||||| Sbjct 56652 CCAATCCTCGATAGTATAGTGGTAAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCA 56593 Query 11785 ATTCCCCGACGAGGAGG 11801 |||||||| || ||||| Sbjct 56592 ATTCCCCGTCGGGGAGG 56576 >seq4354 Length=768200 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||| |||||||||||| ||||| ||| ||||| | ||| |||||||||||| ||| Sbjct 274760 TTCCTCGATAGTATAGTGGTGAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCAATT 274701 Query 8717 CCCCGACGAGGAG 8729 ||||| || |||| Sbjct 274700 CCCCGTCGGGGAG 274688 Score = 82.4 bits (90), Expect = 1e-10 Identities = 68/81 (84%), Gaps = 3/81 (4%) Strand=Plus/Minus Query 11722 TAACCCAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGG 11780 ||||| ||||||| ||||||||||||| |||| ||| ||||| | ||| ||||||||| Sbjct 289397 TAACC--GTCCTCGATAGTATAGTGGTAAGTATCTCCGCCTGTCACGCGGAAGACCGGGG 289340 Query 11781 TTCGATTCCCCGACGAGGAGG 11801 ||| |||||||| || ||||| Sbjct 289339 TTCAATTCCCCGTCGGGGAGG 289319 Score = 82.4 bits (90), Expect = 1e-10 Identities = 68/81 (84%), Gaps = 3/81 (4%) Strand=Plus/Minus Query 11722 TAACCCAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGG 11780 ||||| ||||||| ||||||||||||| |||| ||| ||||| | ||| ||||||||| Sbjct 291271 TAACC--GTCCTCGATAGTATAGTGGTAAGTATCTCCGCCTGTCACGCGGAAGACCGGGG 291214 Query 11781 TTCGATTCCCCGACGAGGAGG 11801 ||| |||||||| || ||||| Sbjct 291213 TTCAATTCCCCGTCGGGGAGG 291193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 651063716977200