Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq67374 123 2e-23 >seq67374 Length=1687 Score = 123 bits (136), Expect = 2e-23 Identities = 150/200 (75%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521 || || |||||||| || ||||| || | || ||| |||| || || |||||||| | Sbjct 462 GTAGATTCTTTCTGGATGTTGTAGTCACTCA--GTGTACGACCATCTTCCAGCTGCTTAC 519 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580 | || | ||||| ||||| ||||| |||||||||||||||||||| ||| ||| || Sbjct 520 CAGCAAAGATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCCTGGAT-TTTGGCT 578 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | ||||| ||||| | || || || || | |||| ||||||||| || || Sbjct 579 TTGACGTTCTCAATGGTGTCTGATGGTTCGACCTCCAGAGTGATGGTTTTGCCAGTGAGG 638 Query 133641 GTTTTTACGAAAATCTGCAT 133660 ||||| || || |||||||| Sbjct 639 GTTTTGACAAAGATCTGCAT 658 Score = 114 bits (126), Expect = 1e-20 Identities = 148/200 (74%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521 || || |||||||| || ||||| || | || ||| ||| || || | |||||| | Sbjct 690 GTAGATTCTTTCTGGATGTTGTAGTCACTCA--GTGTACGGCCATCTTCCAACTGCTTAC 747 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580 | || | ||||| |||||||| || |||||||| ||||||||||| ||| ||| || Sbjct 748 CAGCAAAGATGAGACGCTGCTGATCTGGAGGGATACCTTCCTTGTCCTGGAT-TTTAGCT 806 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | ||||| ||||| | || || || || | ||||| ||||||||| || || Sbjct 807 TTGACATTCTCAATAGTGTCTGATGGTTCAACCTCAAGGGTGATGGTTTTGCCAGTGAGG 866 Query 133641 GTTTTTACGAAAATCTGCAT 133660 ||||| || || |||||||| Sbjct 867 GTTTTGACAAAGATCTGCAT 886 Score = 114 bits (126), Expect = 1e-20 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || ||||||||||| || ||||| || | || ||| |||| || || | |||||| | Sbjct 1146 GTAGACTCTTTCTGGATGTTGTAGTCACTCA--GTGTACGACCATCTTCCAACTGCTTAC 1203 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| ||||| ||||| || ||||| ||||| ||||| ||| ||| || Sbjct 1204 CAGCAAAGATGAGACGCTGTTGGTCTGGTGGGATACCTTCTTTGTCCTGGATTTTTGCCT 1263 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||||| ||||| | || || || || | ||||| ||| ||||| || || | Sbjct 1264 TAACATTCTCAATGGTGTCTGATGGTTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGGG 1323 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| ||||| |||||||| Sbjct 1324 TTTTGACGAAGATCTGCAT 1342 Score = 105 bits (116), Expect = 6e-18 Identities = 146/200 (73%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521 || || |||||||| || || || || | || ||| |||| ||||| |||||||||| Sbjct 1374 GTAGATTCTTTCTGGATGTTATAGTCACTCA--GTGTACGACCATCCTCCAGCTGCTTGC 1431 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580 | || | || | | |||||| || |||||||| ||||| ||||| ||| |||||| Sbjct 1432 CAGCAAAGATCAATCTCTGCTGATCTGGAGGGATACCTTCTTTGTCCTGGAT-TTTTGCT 1490 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | |||| ||||| | || || || || | ||||| ||| ||||| || || Sbjct 1491 TTGACATTTTCAATGGTGTCTGATGGTTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGG 1550 Query 133641 GTTTTTACGAAAATCTGCAT 133660 ||||| || || |||||||| Sbjct 1551 GTTTTGACAAAGATCTGCAT 1570 Score = 86.0 bits (94), Expect = 6e-12 Identities = 105/139 (76%), Gaps = 6/139 (4%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521 || || |||||||| || ||||| || | || ||| |||| || || ||||| |||| Sbjct 121 GTAGATTCTTTCTGGATGTTGTAGTCACTCA--GTGTACGACCATCTTCCAGCTGTTTGC 178 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580 | || | ||||| |||||||| || |||||||| ||||||||||| ||| |||||| Sbjct 179 CGGCAAAGATGAGACGCTGCTGATCTGGAGGGATACCTTCCTTGTCTTGGAT-TTTTGCT 237 Query 133581 TTGAGCTGCTCAACCGTGT 133599 |||| | ||||| |||| Sbjct 238 TTGACGTTCTCAATGGTGT 256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482101937416200