Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq67374 114 8e-21 seq2045 84.2 1e-11 >seq67374 Length=1687 Score = 114 bits (126), Expect = 8e-21 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| | ||| | ||||| || ||||| ||||| || |||||||| || Sbjct 659 ACCACCTCGAAGACGGAGTACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACT 718 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||||| || | || ||||| || || || ||||| || | ||||||||||||| | || Sbjct 719 CAGTGTACGGCCATCTTCCAACTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGAGG 778 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||||| | || |||| || | ||||| || ||| | Sbjct 779 GATACCTTCCTTGTCCTGGATTTT-AGCTTTGACATTCTCAATAGTGTCTGATGGTTCAA 837 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| ||||| ||||| || || | ||||| ||||||||||||||| Sbjct 838 CCTCAAGGGTGATGGTTTTGCCAGTGAGGGTTTTGACAAAGATCTGCATA 887 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | ||||| || ||||| ||||| || ||||| || || Sbjct 1343 ACCACCACGCAGACGGAGAACCAAGTGAAGAGTAGATTCTTTCTGGATGTTATAGTCACT 1402 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||||| || | || |||| || || || ||||| ||||| | |||||||||| | || Sbjct 1403 CAGTGTACGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGAGG 1462 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| ||||| || || |||| || | |||||| || ||| | Sbjct 1463 GATACCTTCTTTGTCCTGGATTTT-TGCTTTGACATTTTCAATGGTGTCTGATGGTTCGA 1521 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||| ||||| || || || || | ||||| |||||||||||||| Sbjct 1522 CCTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 1570 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || ||||| |||||| || |||||||| || Sbjct 1115 ACCACCACGGAGACGGAGTACCAAGTGAAGAGTAGACTCTTTCTGGATGTTGTAGTCACT 1174 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||||| || | || ||||| || || || ||||| || | |||||| || ||| | || Sbjct 1175 CAGTGTACGACCATCTTCCAACTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGTGG 1234 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| ||||| || | ||||| || | |||||| || ||| | Sbjct 1235 GATACCTTCTTTGTCCTGGATTTT-TGCCTTAACATTCTCAATGGTGTCTGATGGTTCAA 1293 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| ||||| || || || || | ||||| || |||||||||||| Sbjct 1294 CCTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTGACGAAGATCTGCATA 1343 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || ||||| ||||| || |||||||| || Sbjct 887 ACCACCACGAAGACGGAGTACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACT 946 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||||| || | || ||||| || || || ||||| || | |||||| || ||| | || Sbjct 947 CAGTGTACGACCATCTTCCAACTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGTGG 1006 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| ||||| || || || | || | |||||| || ||| | Sbjct 1007 GATACCTTCTTTGTCCTGGATTTT-TGCTTTGACGTTCTCAATGGTGTCTGATGGTTCAA 1065 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| ||||| || || | ||||| ||||||||||||||| Sbjct 1066 CCTCCAGAGTGATGGTTTTGCCAGTGAGGGTTTTGACAAAGATCTGCATA 1115 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || ||||| ||||| || |||||||| || Sbjct 431 ACCACCACGAAGACGGAGTACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACT 490 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||||| || | || |||| || || || ||||| || | |||||| || ||| | || Sbjct 491 CAGTGTACGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGAGG 550 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700 | ||||| ||||| ||||| ||| | | | ||| |||||| || ||| | Sbjct 551 GATGCCTTCCTTGTCCTGGATTTTGGCTTTGA-CGTTCTCAATGGTGTCTGATGGTTCGA 609 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| ||||| || || | ||||| ||||||||||||||| Sbjct 610 CCTCCAGAGTGATGGTTTTGCCAGTGAGGGTTTTGACAAAGATCTGCATA 659 Score = 84.2 bits (92), Expect = 1e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||| | ||||| || ||||| ||||| || |||||||| || Sbjct 91 CCACCACGCAGACGGAGTACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTC 150 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 ||||| || | || |||| ||||| |||||||| || | ||||||||||||| | || Sbjct 151 AGTGTACGACCATCTTCCAGCTGTTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGG 210 Query 33643 ACACCTTCTTTGTC 33656 | |||||| ||||| Sbjct 211 ATACCTTCCTTGTC 224 >seq2045 Length=971168 Score = 84.2 bits (92), Expect = 1e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||| ||||| ||||| ||||| || |||||||| || || || || ||| | || || Sbjct 725453 CACTAAATGAAGAGTAGATTCTTTCTGGATGTTGTAGTCTGATAGAGTACGTCCATCTTC 725512 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCT 33648 | |||||||||||||||||||| | |||||||||| | || | |||| Sbjct 725513 AAGCTGTTTTCCGGCAAAAATCAACCTCTGCTGATCTGGGGGGATACCT 725561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 327829653009600