Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq67374 107 2e-18 >seq67374 Length=1687 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| || ||||||||||| |||| ||||| |||||| ||||| ||||| | | Sbjct 465 GATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCTTCCAGCTGCTTACCAGCA 524 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| ||||||||||| |||||||| |||||||| || || ||||| ||| | Sbjct 525 AAGATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCCTGGATTTTGGCTTTGACG 584 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | || || || || | || | ||||| ||||| || ||||| Sbjct 585 TTCTCAATGGTGTCTGATGGTTCGACCTCCAGAGTGATGGTTTTGCCAGTGAGGGTTTTG 644 Query 132110 ATGAAAATCTGCAT 132123 | || |||||||| Sbjct 645 ACAAAGATCTGCAT 658 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| || ||||||||||| |||| ||||| |||||| | ||| ||||| | | Sbjct 693 GATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGGCCATCTTCCAACTGCTTACCAGCA 752 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| ||||||||||| || ||||| || || ||||| ||| | Sbjct 753 AAGATGAGACGCTGCTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTAGCTTTGACA 812 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||| || | || || || || | || | ||||| ||||| || ||||| Sbjct 813 TTCTCAATAGTGTCTGATGGTTCAACCTCAAGGGTGATGGTTTTGCCAGTGAGGGTTTTG 872 Query 132110 ATGAAAATCTGCAT 132123 | || |||||||| Sbjct 873 ACAAAGATCTGCAT 886 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| || ||||||||||| |||| ||||| |||||| | ||| ||||| | | Sbjct 921 GATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCTTCCAACTGCTTACCAGCA 980 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| ||||||||||| ||||| || || |||||||| || |||||| ||| | Sbjct 981 AAGATGAGACGCTGTTGGTCTGGTGGGATACCTTCTTTGTCCTGGATTTTTGCTTTGACG 1040 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | || || || || | || | ||||| ||||| || ||||| Sbjct 1041 TTCTCAATGGTGTCTGATGGTTCAACCTCCAGAGTGATGGTTTTGCCAGTGAGGGTTTTG 1100 Query 132110 ATGAAAATCTGCAT 132123 | || |||||||| Sbjct 1101 ACAAAGATCTGCAT 1114 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||| || ||||||||||| |||| ||||| |||||| | ||| ||||| | | Sbjct 1149 GACTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCTTCCAACTGCTTACCAGCA 1208 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| ||||||||||| ||||| || || |||||||| || |||||| || | Sbjct 1209 AAGATGAGACGCTGTTGGTCTGGTGGGATACCTTCTTTGTCCTGGATTTTTGCCTTAACA 1268 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | || || || || | || | || || ||||| || ||||| Sbjct 1269 TTCTCAATGGTGTCTGATGGTTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTG 1328 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 1329 ACGAAGATCTGCAT 1342 Score = 98.7 bits (108), Expect = 9e-16 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| || | ||||| || | | || ||||| || ||||||||||| |||| || Sbjct 96 ACGCAGACGGAGTACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTCAGTGT 155 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| |||||| |||||||| |||| | |||| |||||||| ||||||||||| || || Sbjct 156 ACGACCATCTTCCAGCTGTTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGGATACC 215 Query 132022 TTCTTTATC 132030 ||| || || Sbjct 216 TTCCTTGTC 224 Score = 89.7 bits (98), Expect = 5e-13 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| || | |||||| || | | || ||||| || ||||| ||||| |||| || Sbjct 1349 ACGCAGACGGAGAACCAAGTGAAGAGTAGATTCTTTCTGGATGTTATAGTCACTCAGTGT 1408 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| ||| || ||||| || || | | |||| | | ||| ||||||||||| || || Sbjct 1409 ACGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGAGGGATACC 1468 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 |||||| || |||||| ||| | | ||| | || || | || || || || | Sbjct 1469 TTCTTTGTCCTGGATTTTTGCTTTGACATTTTCAATGGTGTCTGATGGTTCGACCTCAAG 1528 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || || ||||| || ||||| | || |||||||| Sbjct 1529 GGTGATGGTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 1570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475310915281800