Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq7011 95.1 4e-16 seq189090 93.3 1e-15 seq6490 93.3 1e-15 seq2841 93.3 1e-15 seq2340 93.3 1e-15 seq75157 89.7 2e-14 seq75156 87.8 6e-14 >seq7011 Length=152619 Score = 95.1 bits (104), Expect = 4e-16 Identities = 63/70 (90%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 2760 GTGTTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCT 2819 ||||| | || ||| |||||||||||||||||| ||||||||||||||||||||||||| Sbjct 114291 GTGTTCACAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCT 114232 Query 2820 GGTTCAACCC 2829 ||||||| || Sbjct 114231 GGTTCAAACC 114222 Score = 93.3 bits (102), Expect = 1e-15 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 111053 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAAC 110994 Query 2829 C 2829 | Sbjct 110993 C 110993 Score = 93.3 bits (102), Expect = 1e-15 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 112613 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAAC 112554 Query 2829 C 2829 | Sbjct 112553 C 112553 Score = 93.3 bits (102), Expect = 1e-15 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 113451 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAAC 113392 Query 2829 C 2829 | Sbjct 113391 C 113391 Score = 93.3 bits (102), Expect = 1e-15 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 139666 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAAC 139607 Query 2829 C 2829 | Sbjct 139606 C 139606 Score = 87.8 bits (96), Expect = 6e-14 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| ||||||||||||||||||||||||||| |||| | Sbjct 115773 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGGTCAAAC 115832 Query 2829 C 2829 | Sbjct 115833 C 115833 Score = 78.8 bits (86), Expect = 3e-11 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| || |||| ||||||||||||||||||||| |||||| |||||||||||||| | Sbjct 112166 GCCGAAATAACTCAATTGGGAGAGCATTAGACTGAATATCTAAGGGTCCCTGGTTCAAAC 112107 Query 2829 C 2829 | Sbjct 112106 C 112106 >seq189090 Length=1662 Score = 93.3 bits (102), Expect = 1e-15 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 893 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAAC 952 Query 2829 C 2829 | Sbjct 953 C 953 >seq6490 Length=105584 Score = 93.3 bits (102), Expect = 1e-15 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 76673 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAAC 76614 Query 2829 C 2829 | Sbjct 76613 C 76613 >seq2841 Length=371040 Score = 93.3 bits (102), Expect = 1e-15 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 139526 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAAC 139467 Query 2829 C 2829 | Sbjct 139466 C 139466 >seq2340 Length=425836 Score = 93.3 bits (102), Expect = 1e-15 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 273126 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAAC 273185 Query 2829 C 2829 | Sbjct 273186 C 273186 Score = 93.3 bits (102), Expect = 1e-15 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 422172 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAAC 422113 Query 2829 C 2829 | Sbjct 422112 C 422112 Score = 87.8 bits (96), Expect = 6e-14 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| | |||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 257150 GCCGAAATCGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAAC 257091 Query 2829 C 2829 | Sbjct 257090 C 257090 >seq75157 Length=109 Score = 89.7 bits (98), Expect = 2e-14 Identities = 52/54 (96%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCC 2829 |||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct 108 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAACC 55 >seq75156 Length=109 Score = 87.8 bits (96), Expect = 6e-14 Identities = 50/51 (98%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 108 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 58 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15811764404475