Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq190700 152 4e-32 >seq190700 Length=4627 Score = 152 bits (168), Expect = 4e-32 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 |||||| | ||||||||| |||||||||| || ||||| |||||||||||||| | ||| Sbjct 2865 TTTGTCATATTTCCAATTGAATATCATGATATCTGGCAGATGTACAAAAAAGCGGAAGCG 2806 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTA 43819 ||||||||||| || || ||||| |||||| | || ||||| |||||| | | Sbjct 2805 TCATTTTGGACGGCTGAGGAAGTAGATTTGTCAAAGGACTTGATCCATTGGGAAGGCCTG 2746 Query 43820 AAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGG 43879 ||| | |||| |||||||| || || ||||| ||||||||||| || || || Sbjct 2745 AAAGATGATGAAAGGCATTTTATTTCACATGTATTGGCTTTTTTTGCTGCAAGTGATGGC 2686 Query 43880 ATAGTCAATGAAAATTTGGTTAGT 43903 || ||||||||||| ||||| ||| Sbjct 2685 ATTGTCAATGAAAACTTGGTAAGT 2662 Score = 111 bits (122), Expect = 1e-19 Identities = 157/220 (71%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 44040 TGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAAT 44099 |||| ||||| || || || ||||| | || | || ||||||||||| || | | Sbjct 1862 TGTTCAATGCAATTGAGACTTTACCTTGTGTGAAGAAGAAGGCAGACTGGGCACTCAGTT 1803 Query 44100 GGATAAATTC---AAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAG 44156 ||||||| || |||| | || ||| ||||| | || || ||||| | || || | Sbjct 1802 GGATAAACTCTGACAATGCATGTTATGGTGAACGCATCGTGGCATTTGCTGCAGTTGAGG 1743 Query 44157 GCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGC 44216 | || |||||||| ||||| ||||| | || || ||||| |||||||| ||| | |||| Sbjct 1742 GAATCTTCTTTTCTGGATCATTTGCATCAATCTTCTGGTTGAAGAAACGTGGTCTCATGC 1683 Query 44217 CTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGA 44256 |||| ||||| || || ||||| | || || | ||||| Sbjct 1682 CTGGCTTGACTTTCTCCAATGAACTTATCAGCAGAGATGA 1643 Score = 100 bits (110), Expect = 2e-16 Identities = 84/103 (82%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 43913 CAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAAT 43972 || || || ||| || |||||||||| ||||| ||||| || |||||||| |||||||| Sbjct 2422 CAGGAGGTGCAAGTAACAGAAGCACGTTGTTTCTATGGTTTCCAAATTGCAATAGAAAAC 2363 Query 43973 ATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCA 44015 || ||||| |||||||||||| | || || || || ||||||| Sbjct 2362 ATCCATTCTGAAATGTACAGTTTGCTTATTGACACATACATCA 2320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396398773871275