Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq67374 123 2e-23 >seq67374 Length=1687 Score = 123 bits (136), Expect = 2e-23 Identities = 154/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097 |||||| || | ||||| ||||| || || |||||||| |||| | || | ||||| Sbjct 905 TACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCTTC 964 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 | ||| ||||| || | |||||||||||||| || || || | ||| ||||| || Sbjct 965 CAACTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGTGGGATACCTTCTTTGTCCTG 1024 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||| || ||| | | | || | ||||||| | |||||| || ||||| || | ||| Sbjct 1025 GATTTTTGCTTTGACGTTCTCAATGGTGTCTGATGGTTCAACCTCCAGAGTGATGGTTTT 1084 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| || || ||||| |||||||| |||||| Sbjct 1085 GCCAGTGAGGGTTTTGACAAAGATCTGCATA 1115 Score = 120 bits (132), Expect = 3e-22 Identities = 153/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097 |||||| || | ||||| ||||| || || |||||||| |||| | || | ||||| Sbjct 449 TACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCTTC 508 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 ||||| ||||| || | |||||||||||||| || || || | || || || || Sbjct 509 CAGCTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCCTG 568 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||| ||| ||| | | | || | ||||||| | ||| || || ||||| || | ||| Sbjct 569 GATTTTGGCTTTGACGTTCTCAATGGTGTCTGATGGTTCGACCTCCAGAGTGATGGTTTT 628 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| || || ||||| |||||||| |||||| Sbjct 629 GCCAGTGAGGGTTTTGACAAAGATCTGCATA 659 Score = 114 bits (126), Expect = 1e-20 Identities = 152/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097 |||||| || | ||||| ||||| || || |||||||| |||| | || | ||||| Sbjct 677 TACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGGCCATCTTC 736 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 | ||| ||||| || | ||||||||||| ||||| || || | ||| || || || Sbjct 737 CAACTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGAGGGATACCTTCCTTGTCCTG 796 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||| || ||| | | || | |||||||| | |||||| || || || || | ||| Sbjct 797 GATTTTAGCTTTGACATTCTCAATAGTGTCTGATGGTTCAACCTCAAGGGTGATGGTTTT 856 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| || || ||||| |||||||| |||||| Sbjct 857 GCCAGTGAGGGTTTTGACAAAGATCTGCATA 887 Score = 102 bits (112), Expect = 7e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097 |||||| || | ||||| ||||| || || |||||||| |||| | || | ||||| Sbjct 1133 TACCAAGTGAAGAGTAGACTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCTTC 1192 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 | ||| ||||| || | |||||||||||||| || || || | ||| ||||| || Sbjct 1193 CAACTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGTGGGATACCTTCTTTGTCCTG 1252 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||| || || | | || | ||||||| | |||||| || || || || | || Sbjct 1253 GATTTTTGCCTTAACATTCTCAATGGTGTCTGATGGTTCAACCTCAAGGGTGATGGTCTT 1312 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| || || ||||| || ||||| |||||| Sbjct 1313 GCCAGTGAGGGTTTTGACGAAGATCTGCATA 1343 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| || |||| || | |||||| || | ||||| ||||| || || |||||||| || Sbjct 90 GCCACCACGCAGACGGAGTACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACT 149 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 || | || | ||||| |||||||| ||||| | ||||||||||| ||||| || || Sbjct 150 CAGTGTACGACCATCTTCCAGCTGTTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGG 209 Query 27140 CACACCCTCTTTATC 27154 | ||| || || || Sbjct 210 GATACCTTCCTTGTC 224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423804081799560