Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1679 102 1e-16 >seq1679 Length=151814 Score = 102 bits (112), Expect = 1e-16 Identities = 150/209 (72%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 110680 AAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTC 110739 |||||| |||| || |||||| |||||| || | ||||| ||||||| | ||| Sbjct 50247 AAACTCCCCTGATAGTACTCTTCTGGAGTAGATATTGCTGGTGTAAGGTTCAATGGCTTC 50188 Query 110740 ATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTT 110799 || || |||| ||| ||||| ||||| || || ||||| |||||||||| || ||||| Sbjct 50187 GTTGTTCCCCAGGATCTGTGCCGTGGATGCCGTCGGCATCGGTGCCATCAGCAGGCTGTT 50128 Query 110800 ACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGT--AGTTGAGCTTG 110857 || | || | || || || ||||||| |||||||||||| || | || | | Sbjct 50127 CCGTACTCCATGCTGGGCAATCTCTTTCTTGAGAGCATCCCAGTCGTGGAGATCAG-TGG 50069 Query 110858 GTTTCACCTTCCCACATGTCAAACTGAAG 110886 || |||| || |||||| || |||||| Sbjct 50068 GTGTCACATT-CCACATATCGTGCTGAAG 50041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626318610948000