Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01]
218,255 sequences; 1,228,694,352 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq67374 93.3 3e-14
>seq67374
Length=1687
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | ||||| || ||||| || || || ||||| || ||
Sbjct 432 CCACCACGAAGACGGAGTACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTC 491
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| || | ||||| || || ||||| ||||| || | |||||||||||| || ||
Sbjct 492 AGTGTACGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGAGGG 551
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || |||||||| ||| ||| | ||| ||| | ||| |||||| || ||
Sbjct 552 ATGCCTTCCTTGTCCTGGAT-TTTGGCTTTGACGTTCTCAATGGTGTCTGATGGTTCGAC 610
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || || ||||| || || | ||||| ||||| ||||||||
Sbjct 611 CTCCAGAGTGATGGTTTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 658
Score = 89.7 bits (98), Expect = 3e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | ||||| || ||||| || || || ||||| || ||
Sbjct 888 CCACCACGAAGACGGAGTACCAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTC 947
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| || | ||||| | || ||||| ||||| || | |||||||||||| || ||
Sbjct 948 AGTGTACGACCATCTTCCAACTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGTGGG 1007
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || || ||||| ||| ||||| ||| ||| | ||| |||||| || ||
Sbjct 1008 ATACCTTCTTTGTCCTGGAT-TTTTGCTTTGACGTTCTCAATGGTGTCTGATGGTTCAAC 1066
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || || ||||| || || | ||||| ||||| ||||||||
Sbjct 1067 CTCCAGAGTGATGGTTTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 1114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 313892424673415
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |