Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq6968 91.5 1e-13 >seq6968 Length=116279 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 27145 GGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGT 27204 ||||| ||||||| |||||| || || ||||||| ||||| ||||| || || ||| Sbjct 48583 GGTTCGACGTGATTTGAGTAGACATGGGCATCTCCCATAGTGTGTACAAAGTCGCCTGGT 48524 Query 27205 TCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAG 27264 | || || ||||| || || ||||||||||| | | || ||||||||||| || || Sbjct 48523 TTCAGACCAGTGACATGCGCTATCATGTACGTCAACAAAGCATAGCTGGCGATATTGAAT 48464 Query 27265 GGTACCCCGAGCCCC 27279 || || || || ||| Sbjct 48463 GGAACTCCAAGACCC 48449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 368524317198905