Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ptychodera_20flava_20[genbank_20GCA_5F001465055.1_202015-12-01] 218,255 sequences; 1,228,694,352 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq67374 120 7e-22 seq2045 89.7 1e-12 >seq67374 Length=1687 Score = 120 bits (132), Expect = 7e-22 Identities = 152/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| ||||| ||||||||||| || | || | |||||||| | Sbjct 452 CAAG-TGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCTTCCA 510 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| || | ||| ||||| | | ||| |||||||| || || | Sbjct 511 GCTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGAGGGATGCCTTCCTTGTCCTGGA 570 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| |||||| |||| | | ||||||| || || || ||||| || ||||||| Sbjct 571 TTTTGGCTTTGACGTTCTCAATGGTGTCTGATGGTTCGACCTCCAGAGTGATGGTTTTGC 630 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| || || || |||| |||||| Sbjct 631 CAGTGAGGGTTTTGACAAAGATCTGCAT 658 Score = 116 bits (128), Expect = 9e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | ||||||||||||||||| ||||||||||| || | || | Sbjct 1124 GAGACGGAGTACCAAGTGAAGAGTAGACTCTTTCTGGATGTTGTAGTCACTCAGTGTACG 1183 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| | || || || ||||| || | ||| ||||| | | ||| ||||| Sbjct 1184 ACCATCTTCCAACTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGTGGGATACCTTC 1243 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 || || || |||||| || ||| |||| | | ||||||| || || ||||| || Sbjct 1244 TTTGTCCTGGATTTTTGCCTTAACATTCTCAATGGTGTCTGATGGTTCAACCTCAAGGGT 1303 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| || || ||||||| |||||| Sbjct 1304 GATGGTCTTGCCAGTGAGGGTTTTGACGAAGATCTGCAT 1342 Score = 114 bits (126), Expect = 3e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| ||||| ||||||||||| || | || | |||||||| | Sbjct 680 CAAG-TGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGGCCATCTTCCA 738 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || ||||| || | |||||| || | | ||| |||||||| || || | Sbjct 739 ACTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGAGGGATACCTTCCTTGTCCTGGA 798 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||||||| |||| | ||||||| || || ||||| || || ||||||| Sbjct 799 TTTTAGCTTTGACATTCTCAATAGTGTCTGATGGTTCAACCTCAAGGGTGATGGTTTTGC 858 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| || || || |||| |||||| Sbjct 859 CAGTGAGGGTTTTGACAAAGATCTGCAT 886 Score = 114 bits (126), Expect = 3e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| ||||| ||||||||||| || | || | |||||||| | Sbjct 908 CAAG-TGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCTTCCA 966 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || ||||| || | ||| ||||| | | ||| ||||| || || || | Sbjct 967 ACTGCTTACCAGCAAAGATGAGACGCTGTTGGTCTGGTGGGATACCTTCTTTGTCCTGGA 1026 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 ||||| |||||| |||| | | ||||||| || || || ||||| || ||||||| Sbjct 1027 TTTTTGCTTTGACGTTCTCAATGGTGTCTGATGGTTCAACCTCCAGAGTGATGGTTTTGC 1086 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| || || || |||| |||||| Sbjct 1087 CAGTGAGGGTTTTGACAAAGATCTGCAT 1114 Score = 107 bits (118), Expect = 4e-18 Identities = 150/209 (72%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| ||||| |||||||| || || | || | ||||| || | Sbjct 1364 CAAG-TGAAGAGTAGATTCTTTCTGGATGTTATAGTCACTCAGTGTACGACCATCCTCCA 1422 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| | |||||||| || | | ||| ||||| || || || | Sbjct 1423 GCTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGAGGGATACCTTCTTTGTCCTGGA 1482 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 ||||| ||||||| | || | | ||||||| || || ||||| || || || |||| Sbjct 1483 TTTTTGCTTTGACATTTTCAATGGTGTCTGATGGTTCGACCTCAAGGGTGATGGTCTTGC 1542 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | ||||| || || || |||| ||||||| Sbjct 1543 CAGTGAGGGTTTTGACAAAGATCTGCATT 1571 Score = 95.1 bits (104), Expect = 3e-14 Identities = 110/147 (75%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| ||||| ||||||||||| || | || | |||||||| | Sbjct 111 CAAG-TGAAGAGTAGATTCTTTCTGGATGTTGTAGTCACTCAGTGTACGACCATCTTCCA 169 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| ||||| ||||| || | |||||| || | | ||| |||||||| ||||| | Sbjct 170 GCTGTTTGCCGGCAAAGATGAGACGCTGCTGATCTGGAGGGATACCTTCCTTGTCTTGGA 229 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGT 152043 ||||| |||||| |||| | | ||| Sbjct 230 TTTTTGCTTTGACGTTCTCAATGGTGT 256 >seq2045 Length=971168 Score = 89.7 bits (98), Expect = 1e-12 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||||||| || | |||||||||||| ||||| ||||||||||| || | || ||| | Sbjct 725445 AGTCTGAGCACTAAATGAAGAGTAGATTCTTTCTGGATGTTGTAGTCTGATAGAGTACGT 725504 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 |||||||| || ||| ||||| || || | ||||||||| || | | ||| ||| Sbjct 725505 CCATCTTCAAGCTGTTTTCCGGCAAAAATCAACCTCTGCTGATCTGGGGGGATACCT 725561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150594264529105