Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq4524 96.9 4e-15 >seq4524 Length=299079 Score = 96.9 bits (106), Expect = 4e-15 Identities = 111/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 119861 CCCACGTATCCGTTGGGATCCGTTCCATCTAACTCGTATTTATCGTTTAAGTAGATA-CA 119919 || ||||| || |||||||| | |||||||| | ||| |||||||| | ||| || || Sbjct 20592 CCTACGTAGCCATTGGGATCTCTGCCATCTAAATTGTACTTATCGTTCAGGTAAATGGCA 20651 Query 119920 GACGCTTAACGCACTTTCAGGAGTCTCGCTCCATTCCAGTAtttttttAGCCCAGTACAT 119979 || || ||| || || | || | |||||||||| ||||| |||||||||||||| Sbjct 20652 TCAGCC-AAGGCATCCTCCGGCGACTTGGTCCATTCCAGAATTTTCTTAGCCCAGTACAT 20710 Query 119980 ACGTAAGTATCCATGCATTTTACCTTC 120006 ||| | | | || |||||||| ||||| Sbjct 20711 ACGCAGGAAACCGTGCATTTTCCCTTC 20737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517514398469640