Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq4245 98.7 7e-16 >seq4245 Length=625183 Score = 98.7 bits (108), Expect = 7e-16 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 102086 TCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCA 102145 || ||||| ||||| ||||| | || | |||||||||| || ||| ||||| ||| Sbjct 241972 TCACCTTCTTCTCTATCATAGAGTCCTCTGTGATCTAAAAATTCTCGAGACCCATTTGCA 241913 Query 102146 TCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAAC 102205 ||||| || || || | | | | ||||| | || | || ||||| | |||||| Sbjct 241912 TCCCATATATGAACATCTTTTTCAGCCAGCTCATGGCCATTTGTTGATCCCCGAATAAAC 241853 Query 102206 CACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA 102264 ||||| || ||||| | || ||||||||||||||| | ||||| || || || ||||| Sbjct 241852 CACAAAAGCTCTTCTAGAATACCTCTCCAAAATACCCGTTTAGTTGTCAAGAGAGGAAA 241794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361229965541573