Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq4245 116 3e-21 >seq4245 Length=625183 Score = 116 bits (128), Expect = 3e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 97450 TCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCA 97509 || ||||||||||||||| ||| || | ||||||| | | ||| ||||||||| Sbjct 241972 TCACCTTCTTCTCTATCATAGAGTCCTCTGTGATCTAAAAATTCTCGAGACCCATTTGCA 241913 Query 97510 TCCCAAATGTGCACACCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAAC 97569 ||||| || || ||| | | | || ||||| | || | || ||||| | |||||| Sbjct 241912 TCCCATATATGAACATCTTTTTCAGCCAGCTCATGGCCATTTGTTGATCCCCGAATAAAC 241853 Query 97570 CACAACAATTCTTCCACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAA 97628 ||||| | ||||| | || ||||||||||||||| | |||||||| ||||||||||| Sbjct 241852 CACAAAAGCTCTTCTAGAATACCTCTCCAAAATACCCGTTTAGTTGTCAAGAGAGGAAA 241794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346763615928110