Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq4524 93.3 8e-14 >seq4524 Length=299079 Score = 93.3 bits (102), Expect = 8e-14 Identities = 118/161 (73%), Gaps = 1/161 (1%) Strand=Plus/Minus Query 189474 TGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTG 189533 |||| | |||||| |||||||| |||| | || ||||| ||||||||||| || || | Sbjct 20745 TGGTCACAGAAGGGAAAATGCACGGTTTCCTGCGTATGTACTGGGCTAAGAAAATTCTGG 20686 Query 189534 AATGGACTAGAACACCTGAAGACGCTTTGAGTTATAGTATCTATTTGAACAACAAGTACG 189593 ||||||| | | || || || || ||| | || || || ||||| | |||||| Sbjct 20685 AATGGACCAAGTCGCCGGAGGATGCCTTGGCTGATGCCATTTACCTGAACGATAAGTACA 20626 Query 189594 AACTAGACGGCACGGATCCTAACGGATACGTAGGTT-GTAT 189633 | |||| |||| ||||| || || |||||||||| |||| Sbjct 20625 ATTTAGATGGCAGAGATCCCAATGGCTACGTAGGTTAGTAT 20585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923141142772920