Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10]
4,823 sequences; 909,764,068 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq1115 86.0 4e-12
>seq1115
Length=79802
Score = 86.0 bits (94), Expect = 4e-12
Identities = 140/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 34192 AGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCC 34251
|||| ||||||||| ||||||||||| ||||| ||| | || || | || |||||
Sbjct 1809 AGTAGATTCTTTCTGGATGTTGTAGTCTGACAGTGTACGACCATCTTCAAGTTGTTTGCC 1750
Query 34252 TGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTT 34311
|| || || || |||||||| ||| || | | || ||||| ||| || ||||
Sbjct 1749 AGCAAAGATAAGACGCTGCTGATCGGGTGGGATACCTTCTTTGTCTTGAATC-TTAGCTT 1691
Query 34312 T-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAG 34370
| | || | || | || | | ||| || || | ||||| ||||| || || || |
Sbjct 1690 TGACATTTTCAATGGTGTCAGATGGTTCAACTTCAAGGGTGATTGTTTTACCAGTAAGTG 1631
Query 34371 TTTTCACAAAGATCTGCAT 34389
|||||||||||||||||||
Sbjct 1630 TTTTCACAAAGATCTGCAT 1612
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323053009726880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |