Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1115 86.0 4e-12 >seq1115 Length=79802 Score = 86.0 bits (94), Expect = 4e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 34192 AGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCC 34251 |||| ||||||||| ||||||||||| ||||| ||| | || || | || ||||| Sbjct 1809 AGTAGATTCTTTCTGGATGTTGTAGTCTGACAGTGTACGACCATCTTCAAGTTGTTTGCC 1750 Query 34252 TGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTT 34311 || || || || |||||||| ||| || | | || ||||| ||| || |||| Sbjct 1749 AGCAAAGATAAGACGCTGCTGATCGGGTGGGATACCTTCTTTGTCTTGAATC-TTAGCTT 1691 Query 34312 T-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAG 34370 | | || | || | || | | ||| || || | ||||| ||||| || || || | Sbjct 1690 TGACATTTTCAATGGTGTCAGATGGTTCAACTTCAAGGGTGATTGTTTTACCAGTAAGTG 1631 Query 34371 TTTTCACAAAGATCTGCAT 34389 ||||||||||||||||||| Sbjct 1630 TTTTCACAAAGATCTGCAT 1612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323053009726880