Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq4695 109 1e-18 >seq4695 Length=2473718 Score = 109 bits (120), Expect = 1e-18 Identities = 157/221 (71%), Gaps = 3/221 (1%) Strand=Plus/Minus Query 102041 GGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCATCA 102100 || |||||| | || ||||| ||| || |||| ||| | ||| | ||| ||||| Sbjct 1456931 GGACTTCATTGTGATTTTGCTTGCCTGATGTTCAAACA---TTTAATCAATAAACCATCT 1456875 Query 102101 AGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTCACA 102160 | ||| || || |||||| | | || || || |||||||||||||| || ||| Sbjct 1456874 AAAGACAGAGTTTATGAAATAATTAAAGATGCTGTTGCCATTGAACAAGAATTCCTTACA 1456815 Query 102161 GTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTGAA 102220 | | |||||||||| || || | || ||||| || || |||||| ||||||||||| Sbjct 1456814 GATGCCCTGCCTGTCAACTTGATTGGTATGAATTGTGAGCTGATGAAGAAGTACATTGAA 1456755 Query 102221 TTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAA 102261 ||||| ||||| | ||| | ||||| ||||| ||||| Sbjct 1456754 TTTGTTGCAGACAGACTTCTAGTTGAGCTGGGATGTGAAAA 1456714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989522848965965