Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq1115 86.0 5e-12 >seq1115 Length=79802 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || || ||||| || ||||||||||| || |||||||| || || || | |||| Sbjct 1823 AATACTAAATGCAGAGTAGATTCTTTCTGGATGTTGTAGTCTGACAGTGTACGACCATCT 1764 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || | ||||||||| ||| | ||||| | ||| |||||| || | ||||||||||| Sbjct 1763 TCAAGTTGTTTGCCAGCAAAGATAAGACGCTGCTGATCGGGTGGGATACCTTCTTTGTCT 1704 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 ||| || ||| || | ||| | || ||||| ||| | ||| || ||| Sbjct 1703 TGAATCTTAGCTTTGACATTTTCAATGGTGTCAGATGGTTCAACTTCAAGGGTGATTGTT 1644 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || || | ||||| ||||| || ||||| Sbjct 1643 TTACCAGTAAGTGTTTTCACAAAGATCTGCAT 1612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419562536533263