Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq4571 87.8 2e-12 >seq4571 Length=833440 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 5585 TCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAG 5644 || || |||||||| ||||||||||| || | || |||| || || | | ||| Sbjct 714700 TCACAAATCAGCTGGGCTATTCGGTCCCCTTTTTTGACCTTAAAGTCATCCTCAGAGAAA 714641 Query 5645 TTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACG 5704 ||||| | || || || ||||| || | |||||| ||| ||||| || || || || Sbjct 714640 TTGAATAAAACAACACCAACGTTTCCTCTGTAGTCTTGGTCAATCACACCAGCACCAACA 714581 Query 5705 TCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAGCACCCATCG 5764 || ||||||| || | |||| || || || || || || | |||||||| ||||| Sbjct 714580 TCAATGAAGTTTTTCGCAGCCAAACCAGAACGTGGGGCAACTCTTCCGTAGCATCCATCT 714521 Query 5765 GGAAGCTGTATCTGCAGGTCCGT 5787 ||||| ||| || | ||| || Sbjct 714520 GGAAGAGCTATTTGAATGTCTGT 714498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430029121267976