Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq470 95.1 7e-15 >seq470 Length=178645 Score = 95.1 bits (104), Expect = 7e-15 Identities = 101/131 (77%), Gaps = 2/131 (2%) Strand=Plus/Plus Query 3615 CAAATGAATTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAGTGAATATA 3674 ||||||||||| | || ||||||||||| || ||||| || || || |||||||| |||| Sbjct 83186 CAAATGAATTGCTCTACTTTGCTGACGTCTGTGCTGGGCCTGGAGGCTTCAGTGAGTATA 83245 Query 3675 TGTTATGGAGAAAGAAATG-GAATATCAAAGGTTATGGTATGACGTTACGCGaaaaaaaT 3733 | |||||||| | |||| | |||| | ||||||| ||| |||| || | | | ||| Sbjct 83246 TTTTATGGAGGAGGAAAGGTGAATCT-AAAGGTTTTGGCCTGACCCTAAGAGGATCCAAT 83304 Query 3734 GATTTTCAACT 3744 || ||| |||| Sbjct 83305 GACTTTAAACT 83315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276537344092969