Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq4725 93.3 7e-14 >seq4725 Length=1544913 Score = 93.3 bits (102), Expect = 7e-14 Identities = 100/130 (77%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 193979 AGGTGAGACATTTGTAACTCGTAAGATTACACAAGGTTTATCTAAGATCTCTGTTGGATT 194038 |||||| ||||| || || ||||||||||||| || | || | || ||| | | || Sbjct 1065700 AGGTGAAACATTCGTCACACGTAAGATTACACGAGCTGTAGCAAAAATCACCCTAGGGCA 1065641 Query 194039 ACAG-AAGATTCTTTATCTTGGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGG 194097 |||| |||| | | | ||||||||| | |||||||| || |||||||| || ||||||| Sbjct 1065640 ACAGAAAGAAT-TGGAACTTGGTAATTTAAATGCTAAAAGAGATTGGGGCCATGCAAAGG 1065582 Query 194098 ATTATGTTGA 194107 | |||||||| Sbjct 1065581 ACTATGTTGA 1065572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807506514515880