Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq4695 143 3e-29 >seq4695 Length=2473718 Score = 143 bits (158), Expect = 3e-29 Identities = 174/235 (74%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 93474 CTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTA 93533 |||| | ||| ||||||||||| ||||| ||||||||| || || | | ||| | Sbjct 1457833 CTACCAAATTCTCATTGACTATCCCATCACTTGCTGCAAAGAATGCAAGGACATGGGAAA 1457892 Query 93534 TAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGAT--AGATCTTTTGAAAGATC 93591 |||||||||| ||||| ||| ||||| ||||| | ||| || ||||| || | ||| Sbjct 1457893 TAAAATGTTTTTCATCTGGTTTCAGCTTTTCCCA--CTGATCAAGGTCTTTAGATAAATC 1457950 Query 93592 GACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTG 93651 || ||||| | ||||| || || || ||||||||||||||||| | ||| ||||| || Sbjct 1457951 CACCTCTTCTGCTGTCCAGAATGAAGCCTCTGCTTTTTTGTACATCTGCCAGATGTCATG 1458010 Query 93652 ATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTCT 93706 || ||||| || || | |||||| | |||||| ||||| || || || ||| Sbjct 1458011 GTACTGAATGGGGAACAAGACAAATCTTCCAGGGTTTTCTTTCAGCAAGGGTTCT 1458065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556827228254520