Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1700 82.4 8e-11 >seq1700 Length=809593 Score = 82.4 bits (90), Expect = 8e-11 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 94174 GGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGG-CTTTCATCGACCT 94232 ||| | || || ||||||| ||||| ||||| ||||| | | ||||| | || | Sbjct 377036 GGTGCCTTTGCAATCTATCTAGAGCCATGGCATGCGGATATCTTTGACTTTCTT-GATTT 377094 Query 94233 GC-GAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGG 94291 | |||| | || || || || | |||| || ||||| || ||||| ||||||||| Sbjct 377095 GAAGAAAAATACAGGGAAA-GAAGAGCAGAGAGCAAGAGATCTTTTCTATGCTCTCTGGA 377153 Query 94292 TGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCA 94351 | || || || || ||| || || ||| | || | ||||| ||| | ||||||| Sbjct 377154 TCCCTGATCTCTTCATGCGGCGTGTAGAGCAGAATGGAGACTGGACTCTGATGTGTCCCA 377213 Query 94352 ATGAATGTCCCGGACTGTCCGACGTTTGTGG 94382 |||||||||| |||||| | || ||||| || Sbjct 377214 ATGAATGTCCAGGACTGGCAGATGTTTGGGG 377244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494693374375080