Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1115 93.3 4e-14 >seq1115 Length=79802 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| || || || ||||| |||||| | || || || | | Sbjct 1612 ATGCAGATCTTTGTGAAAACACTTACTGGTAAAACAATCACCCTTGAAGTTGAACCATCT 1671 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | ||| | |||| || || | |||||||| || || || |||| || Sbjct 1672 GACACCATTGAAAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATCCCACCCGATCAG 1731 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | || |||||||| || || || | || || || ||||||||| Sbjct 1732 CAGCGTCTTATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACACTGTCAGACTACAAC 1791 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 ||||| || ||| | || |||||||| || Sbjct 1792 ATCCAGAAAGAATCTACTCTGCATTTAGT 1820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500142645832320