Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq66 82.4 9e-11 >seq66 Length=970343 Score = 82.4 bits (90), Expect = 9e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 153900 AGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATC 153959 ||| | || |||||||| ||||| ||||| ||||| |||||||| ||||||||||| || Sbjct 228831 AGACTTGCTCTACAGACAAGAGAACAGCACATCAGAAGAGACAAGGCAACCAGTAATATA 228890 Query 153960 TGCACAGCTCAGG 153972 |||||||| |||| Sbjct 228891 TGCACAGCACAGG 228903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579177880708320