Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1700 102 2e-16 >seq1700 Length=809593 Score = 102 bits (112), Expect = 2e-16 Identities = 175/249 (70%), Gaps = 4/249 (2%) Strand=Plus/Minus Query 213717 TACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACC-CTGTCCAGTCCCGGACAGGA 213775 |||| || ||||||| | || || | ||||| || ||| ||||||| ||||| Sbjct 377274 TACTTCTCATAGAGCTTCTCAAACTCTTCACCCCAAACATCTG-CCAGTCCTGGACATTC 377216 Query 213776 TGCGGGACACATGAGGCTCCAGTCCCCGTCAT-CTCTGACTCTCTGCATGAACAGGTCCG 213834 ||||||||| || ||||||| || | | |||| || | | ||||||| || || | Sbjct 377215 ATTGGGACACATCAGAGTCCAGTCTCCATTCTGCTCT-ACACGCCGCATGAAGAGATCAG 377157 Query 213835 GGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGC 213894 ||| ||| || || ||| || || || | ||| ||| || || | ||||| Sbjct 377156 GGATCCAGAGAGCATAGAAAAGATCTCTTGCTCTCTGCTCTTCTTTCCCTGTATTTTTCT 377097 Query 213895 GCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGC 213954 || ||| |||||||||||||| ||||| ||||| ||||| | ||||| |||||||| | Sbjct 377096 TCAAATCAAGAAAGTCAAAGATATCCGCATGCCATGGCTCTAGATAGATTGCAAAGGCAC 377037 Query 213955 CCGGCCTCT 213963 | || |||| Sbjct 377036 CAGGTCTCT 377028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931476640216320