Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1700 116 7e-21 >seq1700 Length=809593 Score = 116 bits (128), Expect = 7e-21 Identities = 169/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 221944 ATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACA 222003 ||||||| | ||||||| |||||| | | || |||| |||||||| |||||| Sbjct 377266 ATAGAGCTTCTCAAACTCTTCACCCCAAACATCTGCCAGTCCTGGACATTCATTGGGACA 377207 Query 222004 CATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAG 222063 ||||||| |||||| || | | || | | |||||||||| || |||||||| || Sbjct 377206 CATCAGAGTCCAGTCTCCATTCTGCTCTACACGCCGCATGAAGAGATCAGGGATCCAGAG 377147 Query 222064 CGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAA 222123 || | || |||||||| | | |||||| || || | |||||| ||| ||| | Sbjct 377146 AGCATAGAAAAGATCTCTTGCTCTCTGCTCTTCTTTCCCTGTATTTTTCTTCAAATCAAG 377087 Query 222124 AAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCT 222182 ||| ||||| || || || ||||| ||||| ||||||| || | || || |||| || Sbjct 377086 AAAGTCAAAGATATCCGCATGCCATGGCTCTAGATAGATTGCAAAGGCACCAGGTCTCT 377028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928788802269120