Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1700 102 1e-16 >seq1700 Length=809593 Score = 102 bits (112), Expect = 1e-16 Identities = 136/187 (73%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 76451 GACTGGGATGTTCTCAAGGAACGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 76508 || ||||||| ||| | ||||||| ||| || || || | |||||||| | | Sbjct 382631 GATTGGGATGGTCTTAGAAAACGCATTGCAA--AGTTTGGCGTTAGAAACAGTCTCCTCA 382688 Query 76509 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 76568 ||||||||||||||||||| ||||| || ||||| | || || ||||||| | ||||| Sbjct 382689 TGGCACCAATGCCAACAGCATCCACAGCTCAAATTCTCGGCAACAATGAATCCATTGAAG 382748 Query 76569 CATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACA 76628 ||||||||| || || ||| |||||| || |||| || ||| ||||||||| Sbjct 382749 CATACACAAGCAATATATACACTAGAAGAGTACTTTCAGGGGAATTTCAAATTGTCAACC 382808 Query 76629 AGCACCT 76635 | || || Sbjct 382809 ATCATCT 382815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596533634310240