Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_020873.1 Length=158621 Score E Sequences producing significant alignments: (Bits) Value seq85 84.2 2e-11 seq121 82.4 8e-11 >seq85 Length=1521119 Score = 84.2 bits (92), Expect = 2e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 157679 GGAATCGAACCCACGACCTACTGCTTACAAGGCAGTCGCTCTAACCAACTGAGCTAAGAA 157738 ||| |||||||| |||||| |||||||| |||||| |||||||||||||||||||| ||| Sbjct 1190081 GGAGTCGAACCCTCGACCTTCTGCTTACTAGGCAGACGCTCTAACCAACTGAGCTATGAA 1190140 Query 157739 G 157739 | Sbjct 1190141 G 1190141 >seq121 Length=962525 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 157679 GGAATCGAACCCACGACCTACTGCTTACAAGGCAGTCGCTCTAACCAACTGAGCTAAGAA 157738 ||| |||||||| |||||| |||||||| |||||| |||||||||||||||||||| | | Sbjct 68615 GGAGTCGAACCCTCGACCTTCTGCTTACTAGGCAGACGCTCTAACCAACTGAGCTATGGA 68556 Query 157739 GGCAAATTGGAGGGA 157753 | || | ||| ||| Sbjct 68555 GCCAGTTGGGATGGA 68541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507428606553480