Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq4695 102 2e-16 >seq4695 Length=2473718 Score = 102 bits (112), Expect = 2e-16 Identities = 147/202 (73%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 133073 AGGTTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAA-CAGCA 133131 || ||||| ||||||| ||| || || | || || ||||||||||| |||||| ||| | Sbjct 1458037 AGATTTGTCTTGTTCCCCATTCAGTACCATGACATCTGGCAGATGTACAAAAAAGCAG-A 1457979 Query 133132 AGATTTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACTGGGAAGC 133191 | || ||| ||||| || || || |||||||| ||||||| | || |||||| Sbjct 1457978 GGCTTCATTCTGGACAGCAGAAGAGGTGGATTTATCTAAAGACCTTGATCAGTGGGAAAA 1457919 Query 133192 CCTTACTGGGGATGAAAAACATTTTATTT-CTATGATTTTAGCGTTTTTTGCTGCGAGTG 133250 || | ||||||||||||||||||| | ||| | | || || ||||| || |||| Sbjct 1457918 GCTGAAACCAGATGAAAAACATTTTATTTCCCATG-TCCTTGCATTCTTTGCAGCAAGTG 1457860 Query 133251 ATGGTATTGTTCTTGAAAATTT 133272 |||| || || ||| ||||| Sbjct 1457859 ATGGGATAGTCAATGAGAATTT 1457838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471726649491351