Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2222 141 1e-27 >seq2222 Length=5634 Score = 141 bits (156), Expect = 1e-27 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||||||| ||| ||| || ||| || ||||||||||| |||||||| | || Sbjct 1259 GCTTGGCCAGTTCTCCGGGCAAGAGCAGACGAACGGCGGTCTGAATCTCGCGACTCGTGA 1318 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 |||| || ||| |||| || |||||| ||||||| | ||||||| |||| | Sbjct 1319 TCGTCGAACGACGGTTGTAGTGAGCGAGACGGGAAGCCTCGGCGGCGATGCGCTCGAAGA 1378 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||| ||||| ||| | |||||| ||| |||| Sbjct 1379 TGTCGTTGACAAAGCTGTTCATGATGCTCATCGCCTTCGAGCTGATGCCGGTGTCTGGGT 1438 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||| | ||||||||||||| Sbjct 1439 GCACCTGCTTCAACACCTTGTAGATG 1464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106743402033891