Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2222 176 7e-38 >seq2222 Length=5634 Score = 176 bits (194), Expect = 7e-38 Identities = 186/243 (77%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||| |||||||||| ||| ||| Sbjct 1220 TGTACTTGGTGACGGCCTTGGTTCCCTCGCTGACGGCGTGCTTGGCCAGTTCTCCGGGCA 1279 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 || ||| || ||||||||||| |||||||| | |||||| || || |||| Sbjct 1280 AGAGCAGACGAACGGCGGTCTGAATCTCGCGACTCGTGATCGTCGAACGACGGTTGTAGT 1339 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| || ||| ||||||| | ||||||| |||| |||||||||||||| ||| Sbjct 1340 GAGCG--AGACGGGAAGCCTCGGCGGCGATGCGCTCGAAGATGTCGTTGACAAAGCTGTT 1397 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||||| || | |||||| ||| |||||||||||||| | |||||| Sbjct 1398 CATGATGCTCATCGCCTTCGAGCTGATGCCGGTGTCTGGGTGCACCTGCTTCAACACCTT 1457 Query 1485708 GTA 1485710 ||| Sbjct 1458 GTA 1460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915733355492297