Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq4782 114 8e-21 >seq4782 Length=111569 Score = 114 bits (126), Expect = 8e-21 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 ||||| || | ||| | || ||| || |||||||||||||| || || ||||| | Sbjct 12870 CTCAGTACTAAGTGGAGAGTAGACTCTTTTTGAATGTTATAGTCTGAGAGAGTGCGCCCG 12811 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || || || ||||| || || || |||| | || ||||| | || | || || || Sbjct 12810 TCCTCAAGCTGCTTACCAGCAAAAATCAACCTCTGTTGGTCAGGAGGAATACCTTCTTTA 12751 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | ||||| |||||| | | || | ||| ||| ||| || |||| ||| ||| Sbjct 12750 TCCTGGATTTTAGCTTTGACATTTTCAATTGTATCACTGGGCTCAACCTCAAGGGTAATG 12691 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 ||||| ||||| |||||||| ||||| ||||||||||| Sbjct 12690 GTCTTGCCCGTCAGGGTCTTCACAAAAATCTGCATGAT 12653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325673655675437