Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq4524 98.7 2e-15 >seq4524 Length=299079 Score = 98.7 bits (108), Expect = 2e-15 Identities = 115/154 (75%), Gaps = 1/154 (1%) Strand=Plus/Minus Query 183054 AGAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGAC 183113 |||||| |||||||| |||| | || |||||||||||||| || || || |||||||| Sbjct 20738 AGAAGGGAAAATGCACGGTTTCCTGCGTATGTACTGGGCTAAGAAAATTCTGGAATGGAC 20679 Query 183114 AAGAACTCCGGAAGATGCTTTGAGTTATAGTATCTATATGAACAATAAGTACGAACTAGA 183173 | | ||||| ||||| ||| | || || || ||||| |||||||| | |||| Sbjct 20678 CAAGTCGCCGGAGGATGCCTTGGCTGATGCCATTTACCTGAACGATAAGTACAATTTAGA 20619 Query 183174 CGGTACGGATCCTAACGGATACGTAGGTT-GTAT 183206 || | ||||| || || |||||||||| |||| Sbjct 20618 TGGCAGAGATCCCAATGGCTACGTAGGTTAGTAT 20585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903356735597280