Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq4695 87.8 4e-12 >seq4695 Length=2473718 Score = 87.8 bits (96), Expect = 4e-12 Identities = 115/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 131465 ATGTATAAGAAATCTGTTGCGGCCTTCTGGACTGTTGAAGAGATCGATATGACCAAAGAT 131524 ||||| || ||| | | || | |||||||| | |||||| | ||| | | ||||| Sbjct 1457995 ATGTACAAAAAAGCAGAGGCTTCATTCTGGACAGCAGAAGAGGTGGATTTATCTAAAGAC 1457936 Query 131525 ATTGATGATTGGGAAAAATT-AACCTTGAATGAAAAAGATTTTGTTTCCAAAGTTCTTGC 131583 ||||| | |||||||| | || | || ||||||| ||||| ||||| | || ||||| Sbjct 1457935 CTTGATCAGTGGGAAAAGCTGAAACCAGA-TGAAAAACATTTTATTTCCCATGTCCTTGC 1457877 Query 131584 ATTCTTCGCCGGAAGTGATGGCATTGTTATTGAAAAT 131620 |||||| || | ||||||||| || || | ||| ||| Sbjct 1457876 ATTCTTTGCAGCAAGTGATGGGATAGTCAATGAGAAT 1457840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186739461273903