Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq4736 98.7 3e-17 seq4705 98.7 3e-17 seq4656 98.7 3e-17 seq4473 98.7 3e-17 seq4347 98.7 3e-17 seq4032 98.7 3e-17 seq3240 98.7 3e-17 seq2617 98.7 3e-17 seq1249 98.7 3e-17 seq683 98.7 3e-17 seq635 98.7 3e-17 seq370 98.7 3e-17 seq2018 95.1 4e-16 seq997 95.1 4e-16 seq563 86.0 2e-13 seq387 86.0 2e-13 seq149 78.8 3e-11 >seq4736 Length=814739 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 367400 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 367341 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 367340 CCGGGTTTCGGC 367329 >seq4705 Length=516850 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 187516 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 187575 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 187576 CCGGGTTTCGGC 187587 >seq4656 Length=260660 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 65829 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 65888 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 65889 CCGGGTTTCGGC 65900 >seq4473 Length=373666 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 8956 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 9015 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 9016 CCGGGTTTCGGC 9027 >seq4347 Length=362615 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 188062 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 188003 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 188002 CCGGGTTTCGGC 187991 >seq4032 Length=498970 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 82129 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 82070 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 82069 CCGGGTTTCGGC 82058 >seq3240 Length=551745 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 25808 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 25867 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 25868 CCGGGTTTCGGC 25879 >seq2617 Length=590266 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 70605 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 70664 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 70665 CCGGGTTTCGGC 70676 >seq1249 Length=751975 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 377471 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 377530 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 377531 CCGGGTTTCGGC 377542 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 381122 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 381181 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 381182 CCGGGGTTCGGC 381193 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| || ||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 383660 GCCGAAATAACTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 383719 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 383720 CCGGGTTTCGGC 383731 Score = 95.1 bits (104), Expect = 4e-16 Identities = 60/65 (92%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGGCT 2835 |||||||||||||||||| |||||||||||||||||||||||||||||| | |||||| | Sbjct 388754 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATCCCGGGTT 388813 Query 2836 TCAGC 2840 || || Sbjct 388814 TCGGC 388818 >seq683 Length=156783 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 76048 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 75989 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 75988 CCGGGTTTCGGC 75977 >seq635 Length=147834 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 3684 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 3743 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 3744 CCGGGTTTCGGC 3755 >seq370 Length=196923 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 134376 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 134435 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 134436 CCGGGTTTCGGC 134447 >seq2018 Length=646094 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||| ||||||||| |||||||||||||||||||||||||||||| | | Sbjct 470072 GCCGAAATAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 470013 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 470012 CCGGGTTTCGGC 470001 >seq997 Length=1145523 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||| ||||||||||||||| | | Sbjct 218589 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCCAAAGGTCCCTGGTTCGATC 218648 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 218649 CCGGGTTTCGGC 218660 >seq563 Length=159545 Score = 86.0 bits (94), Expect = 2e-13 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCC 2830 |||||||||||| ||||| |||||||||||||||||||| ||||||||||||||| Sbjct 148700 TAGCTCAGTTGGAAGAGCGTTAGACTGAAGATCTAAAGGCCCCTGGTTCAACCCC 148646 >seq387 Length=325552 Score = 86.0 bits (94), Expect = 2e-13 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 2774 AGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCC 2830 |||||||||||||||||||| ||||||||||||||| |||| ||||||||||| ||| Sbjct 51304 AGTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTTAAGGCCCCTGGTTCAATCCC 51248 >seq149 Length=246766 Score = 78.8 bits (86), Expect = 3e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||| ||| ||||| ||||||| || ||||||||||||||||||| | | Sbjct 175726 GCCGAAATAGCTCAGCTGGTAGAGCGTTAGACTAAAAATCTAAAGGTCCCTGGTTCGAAC 175667 Query 2829 CCGGGCTT 2836 ||||| || Sbjct 175666 CCGGGTTT 175659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15848763908835