Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq1115 89.7 4e-13 >seq1115 Length=79802 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || ||||| |||||| | ||||| || || || ||| | ||| ||||| Sbjct 1612 ATGCAGATCTTTGTGAAAACACTTACTGGTAAAACAATCACCCTTGAAGTTGAACCATCT 1671 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | || ||| || ||| ||||||||||| | || ||||| Sbjct 1672 GACACCATTGAAAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATCCCACCCGATCAG 1731 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || | ||||| | ||| ||||||||| | |||||| | || || || |||||| Sbjct 1732 CAGCGTCTTATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACACTGTCAGACTACAAC 1791 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 || || ||||||||||| || ||||||||||| Sbjct 1792 ATCCAGAAAGAATCTACTCTGCATTTAGTATT 1823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402305950940384