Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2222 134 2e-25 >seq2222 Length=5634 Score = 134 bits (148), Expect = 2e-25 Identities = 171/234 (73%), Gaps = 10/234 (4%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATC--CTCCAACAAGT 724968 |||||||||||| | |||||||||||||| |||| |||| ||| || | Sbjct 1463 ATCTACAAGGTGTTGAAGCAGGTGCACCCAGACACCGG-----CATCAGCTCGAA---GG 1412 Query 724969 CCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCG 725028 | ||| ||||||||| |||||||||||||| |||| ||||||| | ||||||| Sbjct 1411 CGATGAGCATCATGAACAGCTTTGTCAACGACATCTTCGAGCGCATCGCCGCCGAGGCTT 1352 Query 725029 GTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCG 725088 || || || | || |||| || |||||| | |||||||| |||||||||| Sbjct 1351 CCCGTCTCGCTCACTACAACCGTCGTTCGACGATCACGAGTCGCGAGATTCAGACCGCCG 1292 Query 725089 TGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | || ||| || ||| ||| |||||||||| |||||||||| |||||| |||| Sbjct 1291 TTCGTCTGCTCTTGCCCGGAGAACTGGCCAAGCACGCCGTCAGCGAGGGAACCA 1238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177346012785326