Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq4782 107 2e-18 >seq4782 Length=111569 Score = 107 bits (118), Expect = 2e-18 Identities = 168/237 (71%), Gaps = 5/237 (2%) Strand=Plus/Minus Query 35504 TTATTTCCACCACGT---AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTG 35560 || |||||||||| | | |||| || || || | ||| ||| ||||||||||| Sbjct 12891 TTCTTTCCACCACCTCTGAGTCTCAGTACTAAGTGGAGAGTAGACTCTTTTTGAATGTTA 12832 Query 35561 TAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGG 35620 || || | | || ||| |||| || ||||||||||| ||||| ||||||| ||| ||| Sbjct 12831 TAGTCTGAGAGAGTGCGCCCGTCCTCAAGCTGCTTACCAGCAAAAATCAACCTCTGTTGG 12772 Query 35621 TCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCT 35679 || | ||||| | || || ||| ||| ||| || || | | || | | || || || Sbjct 12771 TCAGGAGGAATACCTTCTTTATCCTGGAT-TTTAGCTTTGACATTTTCAATTGTATCACT 12713 Query 35680 CGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || ||||| | || || || || ||||||| || |||||||| |||||||| Sbjct 12712 GGGCTCAACCTCAAGGGTAATGGTCTTGCCCGTCAGGGTCTTCACAAAAATCTGCAT 12656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450766422780840