Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1700 102 1e-16 >seq1700 Length=809593 Score = 102 bits (112), Expect = 1e-16 Identities = 136/187 (73%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 110660 AGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTT 110719 || || | ||||||||| ||| || |||| || |||||| ||| || || || Sbjct 382815 AGATGATGGTTGACAATTTGAAATTCCCCTGAAAGTACTCTTCTAGTGTATATATTGCTT 382756 Query 110720 GTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 110779 ||||||| ||||| | ||||||| || || | ||||| || ||||| |||||||||||| Sbjct 382755 GTGTATGCTTCAATGGATTCATTGTTGCCGAGAATTTGAGCTGTGGATGCTGTTGGCATT 382696 Query 110780 GGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTG--ATGCGTTCCTTGAGAACAT 110837 |||||||| | |||||||| | || || || ||| ||||||| | ||| ||| Sbjct 382695 GGTGCCATGAGGAGACTGTTTCTAACGCCAAACT--TTGCAATGCGTTTTCTAAGACCAT 382638 Query 110838 CCCAGTC 110844 |||| || Sbjct 382637 CCCAATC 382631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627994137520800