Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq4695 84.2 2e-11 >seq4695 Length=2473718 Score = 84.2 bits (92), Expect = 2e-11 Identities = 122/170 (72%), Gaps = 3/170 (2%) Strand=Plus/Minus Query 59931 AAAGCAGAATGGGCCATGCAGTGGATGAGTCCTG--GAGCATC-ATTTGCACAACGTCTC 59987 || |||||||||||||| ||||||| || || ||||||| || || | | Sbjct 1457433 AAGGCAGAATGGGCCATTAAGTGGATTGGTGATGCTGAGCATCCATACAGTGAAAGAGTT 1457374 Query 59988 ATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGG 60047 ||||||||||| |||||||| || || |||||||| || ||| ||| ||||| ||| Sbjct 1457373 GTAGCTTTTGCAGCTGTGGAAGGGATTTTTTTCTCTGGATCCTTCGCTGCAATTTTTTGG 1457314 Query 60048 CTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGAT 60097 | |||||| | || | ||||| ||| | | |||| ||| ||||| || Sbjct 1457313 TTGAAAAAGAGGGGGATTATGCCTGGCTTAACTTTCAGCAATGAGCTTAT 1457264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548491730811120