Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Radix_20auricularia_20[genbank_20GCA_5F002072015.1_202017-05-10] 4,823 sequences; 909,764,068 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq4782 114 9e-21 >seq4782 Length=111569 Score = 114 bits (126), Expect = 9e-21 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||| ||||||| || | ||| || || ||| ||||| ||||| || || | | Sbjct 12882 CCACCTCTGAGTCTCAGTACTAAGTGGAGAGTAGACTCTTTTTGAATGTTATAGTCTGAG 12823 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || |||| |||| || |||||||| || ||||| ||||| | ||| || || | ||| Sbjct 12822 AGAGTGCGCCCGTCCTCAAGCTGCTTACCAGCAAAAATCAACCTCTGTTGGTCAGGAGGA 12763 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | |||||| || ||| || || || | || | || || || || || ||| Sbjct 12762 ATACCTTCTTTATCCTGGATTTTAGCTTTGACATTTTCAATTGTATCACTGGGCTCAACC 12703 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || | ||||| ||||| ||||| ||||||||||| || || ||||||||| Sbjct 12702 TCAAGGGTAATGGTCTTGCCCGTCAGGGTCTTCACAAAAATCTGCATGATG 12652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359969239651791