Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ramazzottius_20varieornatus_20[genbank_20GCA_5F001949185.1_202016- 11-09] 200 sequences; 55,842,812 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq14 127 2e-24 >seq14 Length=1536585 Score = 127 bits (140), Expect = 2e-24 Identities = 129/168 (77%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 17226 GGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGG 17285 |||| | || ||||| ||||| || | |||||||||||| || || | |||||||||| Sbjct 515825 GGTCTTTGATGTACGTGTCGATCAGCAAGCTGTACATTTCCGAATGGACATTCTCCATGG 515884 Query 17286 CTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTT 17345 | ||||| || ||||| || | |||||||| | ||| || ||||| |||| || | Sbjct 515885 CGATCTGGAAGCCGTAGAATGAGCGGGCTTCAGGTATCTGGACTTCTTGCGAGAACCGCT 515944 Query 17346 CCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCA 17393 | | || |||||||| |||||||||||||| |||||||| || |||| Sbjct 515945 CGGTTAAGTTTTCGTTGACGATGCCGTCGCTAGCGGCGAAGAAGGCCA 515992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517544306136000