Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ramazzottius_20varieornatus_20[genbank_20GCA_5F001949185.1_202016- 11-09] 200 sequences; 55,842,812 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq4 109 6e-19 >seq4 Length=4740345 Score = 109 bits (120), Expect = 6e-19 Identities = 103/129 (80%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 145694 CGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCC-CCGGGCTCGAGG 145752 ||||||| ||||||| |||||| || ||||| ||||||||| || |||| ||| || Sbjct 2915676 CGTGGTTCAGGTAGATGTGCGCATCACCCAGCGTGTGGATGAATTCTGCCGGTCTC-AGA 2915734 Query 145753 CCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACC 145812 ||||||| || |||| ||||||||| | || ||||||||||| |||||||| || ||| Sbjct 2915735 CCCGTGACATGCGCGATCATGTAGGTTAAAAGCGAGTAGCTGGCAATGTTGAACGGAACC 2915794 Query 145813 CCCAGCCCC 145821 || || ||| Sbjct 2915795 CCAAGACCC 2915803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590075324808000