Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ramazzottius_20varieornatus_20[genbank_20GCA_5F001949185.1_202016- 11-09] 200 sequences; 55,842,812 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq14 89.7 5e-13 >seq14 Length=1536585 Score = 89.7 bits (98), Expect = 5e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 16505 ATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGA 16564 || || || || || || || || |||||||| ||||| | ||||||||| || ||||| Sbjct 515833 ATGTACGTGTCGATCAGCAAGCTGTACATTTCCGAATGGACATTCTCCATGGCGATCTGG 515892 Query 16565 AAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAG 16624 || || || || | | ||||| | ||| || ||||| | |||| || | |||| Sbjct 515893 AAGCCGTAGAATGAGCGGGCTTCAGGTATCTGGACTTCTTGCGAGAACCGCTCGGTTAAG 515952 Query 16625 TTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTAT 16668 |||||||| || || || |||||||| || || || || || || Sbjct 515953 TTTTCGTTGACGATGCCGTCGCTAGCGGCGAAGAAGGCCAGGAT 515996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462510843720000